CRAN Package Check Results for Package ADAPTS

Last updated on 2020-10-20 13:49:19 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.5 6.42 89.30 95.72 OK
r-devel-linux-x86_64-debian-gcc 1.0.6 4.75 66.83 71.58 OK
r-devel-linux-x86_64-fedora-clang 1.0.6 128.69 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.6 119.37 OK
r-devel-windows-ix86+x86_64 1.0.5 8.00 90.00 98.00 NOTE
r-patched-linux-x86_64 1.0.6 5.17 85.62 90.79 OK
r-patched-solaris-x86 1.0.6 149.70 NOTE
r-release-linux-x86_64 1.0.6 5.42 85.97 91.39 OK
r-release-macos-x86_64 1.0.6 ERROR
r-release-windows-ix86+x86_64 1.0.5 12.00 122.00 134.00 NOTE
r-oldrel-macos-x86_64 1.0.6 ERROR
r-oldrel-windows-ix86+x86_64 1.0.6 10.00 121.00 131.00 NOTE

Check Details

Version: 1.0.6
Check: installed package size
Result: NOTE
     installed size is 7.6Mb
     sub-directories of 1Mb or more:
     doc 7.1Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-patched-solaris-x86, r-release-macos-x86_64, r-oldrel-windows-ix86+x86_64

Version: 1.0.5
Check: installed package size
Result: NOTE
     installed size is 7.5Mb
     sub-directories of 1Mb or more:
     doc 7.1Mb
Flavors: r-devel-windows-ix86+x86_64, r-release-windows-ix86+x86_64

Version: 1.0.6
Check: package dependencies
Result: NOTE
    Package suggested but not available for checking: ‘DeconRNASeq’
Flavor: r-release-macos-x86_64

Version: 1.0.6
Check: examples
Result: ERROR
    Running examples in ‘ADAPTS-Ex.R’ failed
    The error most likely occurred in:
    
    > ### Name: estCellPercent.DeconRNASeq
    > ### Title: DeconRNASeq deconvolution
    > ### Aliases: estCellPercent.DeconRNASeq
    >
    > ### ** Examples
    >
    > #This toy example
    > library(ADAPTS)
    > fullLM22 <- ADAPTS::LM22[1:30, 1:4]
    > smallLM22 <- fullLM22[1:25,]
    >
    > cellEst <- estCellPercent.DeconRNASeq(refExpr=smallLM22, geneExpr=fullLM22)
    Loading required namespace: DeconRNASeq
    Failed with error: ‘there is no package called ‘DeconRNASeq’’
    estCellPercent.DeconRNASeq requires DeconRNASeq
    https://www.bioconductor.org/packages/release/bioc/html/DeconRNASeq.html
    Error in estCellPercent.DeconRNASeq(refExpr = smallLM22, geneExpr = fullLM22) :
     DeconRNASeq not installed
    Execution halted
Flavor: r-release-macos-x86_64

Version: 1.0.6
Check: package dependencies
Result: ERROR
    Package required but not available: ‘WGCNA’
    
    Package suggested but not available for checking: ‘DeconRNASeq’
    
    See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
    manual.
Flavor: r-oldrel-macos-x86_64