CRAN Package Check Results for Package oXim

Last updated on 2019-12-14 00:54:12 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.2.2 7.67 59.49 67.16 ERROR
r-devel-linux-x86_64-debian-gcc 1.2.2 5.60 46.10 51.70 ERROR
r-devel-linux-x86_64-fedora-clang 1.2.2 95.04 OK
r-devel-linux-x86_64-fedora-gcc 1.2.2 92.00 OK
r-devel-windows-ix86+x86_64 1.2.2 13.00 112.00 125.00 OK
r-devel-windows-ix86+x86_64-gcc8 1.2.2 16.00 107.00 123.00 OK
r-patched-linux-x86_64 1.2.2 5.40 64.65 70.05 OK
r-patched-solaris-x86 1.2.2 148.20 OK
r-release-linux-x86_64 1.2.2 5.46 65.55 71.01 OK
r-release-windows-ix86+x86_64 1.2.2 11.00 82.00 93.00 OK
r-release-osx-x86_64 1.2.2 OK
r-oldrel-windows-ix86+x86_64 1.2.2 8.00 77.00 85.00 OK
r-oldrel-osx-x86_64 1.2.2 OK

Check Details

Version: 1.2.2
Check: examples
Result: ERROR
    Running examples in 'oXim-Ex.R' failed
    The error most likely occurred in:
    
    > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
    > ### Name: echogramPlot.default
    > ### Title: Plot a matrix of a filtered echogram.
    > ### Aliases: echogramPlot.default echogramPlot echogramPlot.matrix
    >
    > ### ** Examples
    >
    > fileMode <- list(fish38_file = system.file("extdata", "fish38.mat", package = "oXim"),
    + fluid120_file = system.file("extdata", "fluid120.mat", package = "oXim"),
    + blue38_file = system.file("extdata", "blue38.mat", package = "oXim"))
    > echoData <- readEchograms(fileMode = fileMode)
    Error in operationFunction(operationsInput) :
     'operationsInput' must be a list of echogram matrices.
    Calls: readEchograms -> getEchoData -> operationsSet -> operationFunction
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc

Version: 1.2.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building 'vignette.Rmd' using rmarkdown
    
    'oXim': Tools for read Echopen outputs and get oxycline limits from echogram data.
    https://cran.r-project.org/web/packages/oXim/index.html
    
    'Echopen': toolbox for the multifrequency analysis of fisheries acoustics data.
    http://www.france-nord.ird.fr/les-ressources/outils-informatiques
    
    Quitting from lines 41-50 (vignette.Rmd)
    Error: processing vignette 'vignette.Rmd' failed with diagnostics:
    'operationsInput' must be a list of echogram matrices.
    --- failed re-building 'vignette.Rmd'
    
    SUMMARY: processing the following file failed:
     'vignette.Rmd'
    
    Error: Vignette re-building failed.
    Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc