Last updated on 2023-03-28 16:51:58 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 3.5-5 | 73.11 | 655.23 | 728.34 | OK | |
| r-devel-linux-x86_64-debian-gcc | 3.5-5 | 59.80 | 490.42 | 550.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 3.5-5 | 967.23 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 3.5-5 | 889.87 | OK | |||
| r-patched-linux-x86_64 | 3.5-5 | 65.40 | 619.43 | 684.83 | OK | |
| r-release-linux-x86_64 | 3.5-5 | 63.55 | 614.52 | 678.07 | OK | |
| r-release-macos-arm64 | 3.5-5 | 284.00 | NOTE | |||
| r-release-macos-x86_64 | 3.5-5 | 387.00 | NOTE | |||
| r-release-windows-x86_64 | 3.5-5 | 276.00 | 739.00 | 1015.00 | NOTE | |
| r-oldrel-macos-arm64 | 3.5-5 | 218.00 | ERROR | |||
| r-oldrel-macos-x86_64 | 3.5-5 | 411.00 | NOTE | |||
| r-oldrel-windows-ix86+x86_64 | 3.5-5 | 155.00 | 895.00 | 1050.00 | NOTE |
Version: 3.5-5
Check: installed package size
Result: NOTE
installed size is 7.7Mb
sub-directories of 1Mb or more:
R 1.2Mb
data 1.9Mb
doc 3.5Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-ix86+x86_64
Version: 3.5-5
Check: examples
Result: ERROR
Running examples in ‘survival-Ex.R’ failed
The error most likely occurred in:
> ### Name: concordance
> ### Title: Compute the concordance statistic for data or a model
> ### Aliases: concordance concordance.coxph concordance.formula
> ### concordance.lm concordance.survreg
> ### Keywords: survival
>
> ### ** Examples
>
> fit1 <- coxph(Surv(ptime, pstat) ~ age + sex + mspike, mgus2)
> concordance(fit1, timewt="n/G2") # Uno's weighting
Call:
concordance.coxph(object = fit1, timewt = "n/G2")
n= 1373
Concordance= 0.6132 se= 0.1026
concordant discordant tied.x tied.y tied.xy
461425.07 290956.09 265.66 120.39 0.00
>
> # logistic regression
> fit2 <- glm(I(sex=='M') ~ age + log(creatinine), binomial, data= flchain)
> concordance(fit2) # equal to the AUC
Error in (function (y, x, strata, weights, ymin = NULL, ymax = NULL, timewt = c("n", :
left hand side of the formula must be a numeric vector,
survival object, or an orderable factor
Calls: concordance ... eval -> eval -> <Anonymous> -> eval -> eval -> <Anonymous>
Execution halted
Flavor: r-oldrel-macos-arm64