blaster: Native R Implementation of an Efficient BLAST-Like Algorithm

Implementation of an efficient BLAST-like sequence comparison algorithm, written in C++11 and using native R datatypes. Blaster is based on 'nsearch' - Schmid et al 2018; <doi:10.1101/399782>.

Version: 1.0.4
Imports: Rcpp (≥ 1.0.5)
LinkingTo: Rcpp
Suggests: covr
Published: 2021-10-27
Author: Manu Tamminen ORCID iD [aut, cre], Timothy Julian ORCID iD [aut], Aditya Jeevennavar ORCID iD [aut], Steven Schmid [aut]
Maintainer: Manu Tamminen <mavatam at utu.fi>
License: BSD_3_clause + file LICENSE
URL: https://github.com/manutamminen/blaster
NeedsCompilation: yes
SystemRequirements: C++14
Materials: README
CRAN checks: blaster results

Documentation:

Reference manual: blaster.pdf

Downloads:

Package source: blaster_1.0.4.tar.gz
Windows binaries: r-devel: blaster_1.0.4.zip, r-devel-UCRT: blaster_1.0.4.zip, r-release: blaster_1.0.4.zip, r-oldrel: blaster_1.0.4.zip
macOS binaries: r-release (arm64): blaster_1.0.4.tgz, r-release (x86_64): blaster_1.0.4.tgz, r-oldrel: blaster_1.0.4.tgz
Old sources: blaster archive

Reverse dependencies:

Reverse imports: prider

Linking:

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