scSorter: Implementation of 'scSorter' Algorithm

Implements the algorithm described in Guo, H., and Li, J. (Not yet published), "scSorter: assigning cells to known cell types according to known marker genes". Clusters cells to known cell types based on marker genes specified for each cell type.

Version: 0.0.1
Depends: R (≥ 3.6.0)
Imports: stats (≥ 3.6.0)
Suggests: knitr, rmarkdown, Seurat
Published: 2020-09-01
Author: Hongyu Guo [aut], Jun Li [aut, cre]
Maintainer: Jun Li <jun.li at nd.edu>
License: GPL-3
NeedsCompilation: no
CRAN checks: scSorter results

Downloads:

Reference manual: scSorter.pdf
Vignettes: scSorter
Package source: scSorter_0.0.1.tar.gz
Windows binaries: r-devel: scSorter_0.0.1.zip, r-release: scSorter_0.0.1.zip, r-oldrel: scSorter_0.0.1.zip
macOS binaries: r-release: scSorter_0.0.1.tgz, r-oldrel: scSorter_0.0.1.tgz

Linking:

Please use the canonical form https://CRAN.R-project.org/package=scSorter to link to this page.